Index

A

AxesArray (class in pysindy) (class in pysindy.utils) (class in pysindy.utils.axes)

B

bacterial() (in module pysindy.utils) (in module pysindy.utils.odes) BaseDifferentiation (class in pysindy) (class in pysindy.differentiation) (class in pysindy.differentiation.base)

BaseFeatureLibrary (class in pysindy.feature_library.base) BaseOptimizer (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.base) burgers_galerkin() (in module pysindy.utils) (in module pysindy.utils.odes)

C

calc_trajectory() (pysindy.ConcatLibrary method) (pysindy.feature_library.base.BaseFeatureLibrary method) (pysindy.feature_library.base.ConcatLibrary method) (pysindy.feature_library.base.TensoredLibrary method) (pysindy.feature_library.ConcatLibrary method) (pysindy.feature_library.generalized_library.GeneralizedLibrary method) (pysindy.feature_library.GeneralizedLibrary method) (pysindy.feature_library.parameterized_library.ParameterizedLibrary method) (pysindy.feature_library.ParameterizedLibrary method) (pysindy.feature_library.TensoredLibrary method) (pysindy.feature_library.weak_pde_library.WeakPDELibrary method) (pysindy.feature_library.WeakPDELibrary method) (pysindy.GeneralizedLibrary method) (pysindy.ParameterizedLibrary method) (pysindy.TensoredLibrary method) (pysindy.WeakPDELibrary method) capped_simplex_projection() (in module pysindy.utils) (in module pysindy.utils.base) coef_ (pysindy.optimizers.sindy_optimizer.SINDyOptimizer property) (pysindy.optimizers.SINDyOptimizer property) (pysindy.SINDyOptimizer property) coefficients() (pysindy.pysindy.SINDy method) (pysindy.SINDy method) complexity (pysindy.MIOSR property) (pysindy.optimizers.base.ComplexityMixin property) (pysindy.optimizers.MIOSR property) (pysindy.optimizers.miosr.MIOSR property) (pysindy.optimizers.sindy_optimizer.SINDyOptimizer property) (pysindy.optimizers.SINDyOptimizer property) (pysindy.optimizers.STLSQ property) (pysindy.optimizers.stlsq.STLSQ property) (pysindy.pysindy.SINDy property) (pysindy.SINDy property) (pysindy.SINDyOptimizer property) (pysindy.STLSQ property)

ComplexityMixin (class in pysindy.optimizers.base) comprehend_axes() (in module pysindy.utils) (in module pysindy.utils.axes) concat_sample_axis() (in module pysindy.utils) (in module pysindy.utils.axes) concatenate() (in module pysindy.utils.axes) ConcatLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.base) ConstrainedSR3 (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.constrained_sr3) convert_u_dot_integral() (pysindy.feature_library.weak_pde_library.WeakPDELibrary method) (pysindy.feature_library.WeakPDELibrary method) (pysindy.WeakPDELibrary method) copy() (pysindy.deeptime.deeptime.SINDyModel method) (pysindy.deeptime.SINDyModel method) correct_shape() (pysindy.feature_library.base.BaseFeatureLibrary method) cubic_damped_SHO() (in module pysindy.utils) (in module pysindy.utils.odes) cubic_oscillator() (in module pysindy.utils) (in module pysindy.utils.odes) CustomLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.custom_library)

D

differentiate() (pysindy.pysindy.SINDy method) (pysindy.SINDy method) disable_trimming() (pysindy.optimizers.SR3 method) (pysindy.optimizers.sr3.SR3 method) (pysindy.SR3 method)

double_pendulum() (in module pysindy.utils) (in module pysindy.utils.odes) drop_nan_samples() (in module pysindy.utils) (in module pysindy.utils.base) duffing() (in module pysindy.utils) (in module pysindy.utils.odes)

E

enable_trimming() (pysindy.optimizers.SR3 method) (pysindy.optimizers.sr3.SR3 method) (pysindy.SR3 method) EnsembleOptimizer (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.base)

enzyme() (in module pysindy.utils) (in module pysindy.utils.odes) equations() (in module pysindy.utils) (in module pysindy.utils.base) (pysindy.pysindy.SINDy method) (pysindy.SINDy method)

F

f_acc() (in module pysindy.utils.odes) f_steer() (in module pysindy.utils.odes) fetch_model() (pysindy.deeptime.deeptime.SINDyEstimator method) (pysindy.deeptime.SINDyEstimator method) FiniteDifference (class in pysindy) (class in pysindy.differentiation) (class in pysindy.differentiation.finite_difference) fit() (pysindy.BaseOptimizer method) (pysindy.ConcatLibrary method) (pysindy.CustomLibrary method) (pysindy.deeptime.deeptime.SINDyEstimator method) (pysindy.deeptime.SINDyEstimator method) (pysindy.feature_library.base.BaseFeatureLibrary method) (pysindy.feature_library.base.ConcatLibrary method) (pysindy.feature_library.base.TensoredLibrary method) (pysindy.feature_library.ConcatLibrary method) (pysindy.feature_library.custom_library.CustomLibrary method) (pysindy.feature_library.CustomLibrary method) (pysindy.feature_library.fourier_library.FourierLibrary method) (pysindy.feature_library.FourierLibrary method) (pysindy.feature_library.generalized_library.GeneralizedLibrary method) (pysindy.feature_library.GeneralizedLibrary method) (pysindy.feature_library.identity_library.IdentityLibrary method) (pysindy.feature_library.IdentityLibrary method) (pysindy.feature_library.pde_library.PDELibrary method) (pysindy.feature_library.PDELibrary method) (pysindy.feature_library.polynomial_library.PolynomialLibrary method) (pysindy.feature_library.PolynomialLibrary method) (pysindy.feature_library.sindy_pi_library.SINDyPILibrary method) (pysindy.feature_library.SINDyPILibrary method) (pysindy.feature_library.TensoredLibrary method) (pysindy.feature_library.weak_pde_library.WeakPDELibrary method) (pysindy.feature_library.WeakPDELibrary method) (pysindy.FourierLibrary method) (pysindy.GeneralizedLibrary method) (pysindy.IdentityLibrary method) (pysindy.optimizers.base.BaseOptimizer method) (pysindy.optimizers.BaseOptimizer method) (pysindy.optimizers.sindy_optimizer.SINDyOptimizer method) (pysindy.optimizers.SINDyOptimizer method) (pysindy.PDELibrary method) (pysindy.PolynomialLibrary method) (pysindy.pysindy.SINDy method) (pysindy.SINDy method) (pysindy.SINDyOptimizer method) (pysindy.SINDyPILibrary method) (pysindy.TensoredLibrary method) (pysindy.utils.axes.SampleConcatter method) (pysindy.utils.SampleConcatter method) (pysindy.WeakPDELibrary method)

flatten_2d_tall() (in module pysindy.utils) (in module pysindy.utils.base) FourierLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.fourier_library) FROLS (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.frols)

G

GeneralizedLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.generalized_library) get_feature_names() (pysindy.ConcatLibrary method) (pysindy.CustomLibrary method) (pysindy.feature_library.base.BaseFeatureLibrary method) (pysindy.feature_library.base.ConcatLibrary method) (pysindy.feature_library.base.TensoredLibrary method) (pysindy.feature_library.ConcatLibrary method) (pysindy.feature_library.custom_library.CustomLibrary method) (pysindy.feature_library.CustomLibrary method) (pysindy.feature_library.fourier_library.FourierLibrary method) (pysindy.feature_library.FourierLibrary method) (pysindy.feature_library.generalized_library.GeneralizedLibrary method) (pysindy.feature_library.GeneralizedLibrary method) (pysindy.feature_library.identity_library.IdentityLibrary method) (pysindy.feature_library.IdentityLibrary method) (pysindy.feature_library.pde_library.PDELibrary method) (pysindy.feature_library.PDELibrary method) (pysindy.feature_library.polynomial_library.PolynomialLibrary method) (pysindy.feature_library.PolynomialLibrary method) (pysindy.feature_library.sindy_pi_library.SINDyPILibrary method) (pysindy.feature_library.SINDyPILibrary method) (pysindy.feature_library.TensoredLibrary method) (pysindy.feature_library.weak_pde_library.WeakPDELibrary method) (pysindy.feature_library.WeakPDELibrary method) (pysindy.FourierLibrary method) (pysindy.GeneralizedLibrary method) (pysindy.IdentityLibrary method) (pysindy.PDELibrary method) (pysindy.PolynomialLibrary method) (pysindy.pysindy.SINDy method) (pysindy.SINDy method) (pysindy.SINDyPILibrary method) (pysindy.TensoredLibrary method) (pysindy.WeakPDELibrary method)

get_params() (pysindy.differentiation.sindy_derivative.SINDyDerivative method) (pysindy.differentiation.SINDyDerivative method) (pysindy.SINDyDerivative method) get_prox() (in module pysindy.utils) (in module pysindy.utils.base) get_regularization() (in module pysindy.utils) (in module pysindy.utils.base) get_spatial_grid() (pysindy.feature_library.base.BaseFeatureLibrary method) (pysindy.feature_library.generalized_library.GeneralizedLibrary method) (pysindy.feature_library.GeneralizedLibrary method) (pysindy.feature_library.pde_library.PDELibrary method) (pysindy.feature_library.PDELibrary method) (pysindy.GeneralizedLibrary method) (pysindy.PDELibrary method)

H

has_model (pysindy.deeptime.deeptime.SINDyEstimator property) (pysindy.deeptime.SINDyEstimator property) has_nonweak() (in module pysindy.feature_library.generalized_library)

has_weak() (in module pysindy.feature_library.generalized_library) hopf() (in module pysindy.utils) (in module pysindy.utils.odes)

I

IdentityLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.identity_library)

implements() (in module pysindy.utils.axes) intercept_ (pysindy.optimizers.sindy_optimizer.SINDyOptimizer property) (pysindy.optimizers.SINDyOptimizer property) (pysindy.SINDyOptimizer property)

K

kinematic_commonroad() (in module pysindy.utils) (in module pysindy.utils.odes)

L

linear_3D() (in module pysindy.utils) (in module pysindy.utils.odes) linear_damped_SHO() (in module pysindy.utils) (in module pysindy.utils.odes) logistic_map() (in module pysindy.utils.odes) logistic_map_control() (in module pysindy.utils.odes) logistic_map_multicontrol() (in module pysindy.utils.odes)

lorenz() (in module pysindy.utils) (in module pysindy.utils.odes) lorenz_control() (in module pysindy.utils) (in module pysindy.utils.odes) lorenz_u() (in module pysindy.utils) (in module pysindy.utils.odes) lotka() (in module pysindy.utils) (in module pysindy.utils.odes)

M

meanfield() (in module pysindy.utils) (in module pysindy.utils.odes) mhd() (in module pysindy.utils) (in module pysindy.utils.odes) MIOSR (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.miosr) module pysindy pysindy.deeptime pysindy.deeptime.deeptime pysindy.differentiation pysindy.differentiation.base pysindy.differentiation.finite_difference pysindy.differentiation.sindy_derivative pysindy.differentiation.smoothed_finite_difference pysindy.differentiation.spectral_derivative pysindy.feature_library pysindy.feature_library.base pysindy.feature_library.custom_library pysindy.feature_library.fourier_library pysindy.feature_library.generalized_library pysindy.feature_library.identity_library pysindy.feature_library.parameterized_library pysindy.feature_library.pde_library pysindy.feature_library.polynomial_library pysindy.feature_library.sindy_pi_library pysindy.feature_library.weak_pde_library pysindy.optimizers pysindy.optimizers.base pysindy.optimizers.constrained_sr3 pysindy.optimizers.frols pysindy.optimizers.miosr pysindy.optimizers.sindy_optimizer pysindy.optimizers.sindy_pi pysindy.optimizers.sr3 pysindy.optimizers.ssr pysindy.optimizers.stable_linear_sr3 pysindy.optimizers.stlsq pysindy.optimizers.trapping_sr3 pysindy.pysindy pysindy.utils pysindy.utils.axes pysindy.utils.base pysindy.utils.odes pysindy.version

N

n_coord (pysindy.AxesArray property) (pysindy.utils.axes.AxesArray property) (pysindy.utils.AxesArray property) n_sample (pysindy.AxesArray property) (pysindy.utils.axes.AxesArray property) (pysindy.utils.AxesArray property)

n_spatial (pysindy.AxesArray property) (pysindy.utils.axes.AxesArray property) (pysindy.utils.AxesArray property) n_time (pysindy.AxesArray property) (pysindy.utils.axes.AxesArray property) (pysindy.utils.AxesArray property)

O

oscillator() (in module pysindy.utils) (in module pysindy.utils.odes)

P

ParameterizedLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.parameterized_library) PDELibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.pde_library) pendulum_on_cart() (in module pysindy.utils) (in module pysindy.utils.odes) PolynomialLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.polynomial_library) powers_ (pysindy.feature_library.polynomial_library.PolynomialLibrary property) (pysindy.feature_library.PolynomialLibrary property) (pysindy.PolynomialLibrary property) predict() (pysindy.optimizers.sindy_optimizer.SINDyOptimizer method) (pysindy.optimizers.SINDyOptimizer method) (pysindy.pysindy.SINDy method) (pysindy.SINDy method) (pysindy.SINDyOptimizer method) print() (pysindy.pysindy.SINDy method) (pysindy.SINDy method) print_model() (in module pysindy.utils) (in module pysindy.utils.base) prox_cad() (in module pysindy.utils) (in module pysindy.utils.base) prox_l0() (in module pysindy.utils) (in module pysindy.utils.base) prox_l1() (in module pysindy.utils) (in module pysindy.utils.base) prox_l2() (in module pysindy.utils) (in module pysindy.utils.base) prox_weighted_l0() (in module pysindy.utils) (in module pysindy.utils.base) prox_weighted_l1() (in module pysindy.utils) (in module pysindy.utils.base) prox_weighted_l2() (in module pysindy.utils) (in module pysindy.utils.base) pysindy module pysindy.deeptime module pysindy.deeptime.deeptime module pysindy.differentiation module pysindy.differentiation.base module pysindy.differentiation.finite_difference module pysindy.differentiation.sindy_derivative module pysindy.differentiation.smoothed_finite_difference module pysindy.differentiation.spectral_derivative module pysindy.feature_library module

pysindy.feature_library.base module pysindy.feature_library.custom_library module pysindy.feature_library.fourier_library module pysindy.feature_library.generalized_library module pysindy.feature_library.identity_library module pysindy.feature_library.parameterized_library module pysindy.feature_library.pde_library module pysindy.feature_library.polynomial_library module pysindy.feature_library.sindy_pi_library module pysindy.feature_library.weak_pde_library module pysindy.optimizers module pysindy.optimizers.base module pysindy.optimizers.constrained_sr3 module pysindy.optimizers.frols module pysindy.optimizers.miosr module pysindy.optimizers.sindy_optimizer module pysindy.optimizers.sindy_pi module pysindy.optimizers.sr3 module pysindy.optimizers.ssr module pysindy.optimizers.stable_linear_sr3 module pysindy.optimizers.stlsq module pysindy.optimizers.trapping_sr3 module pysindy.pysindy module pysindy.utils module pysindy.utils.axes module pysindy.utils.base module pysindy.utils.odes module pysindy.version module

R

reorder_constraints() (in module pysindy.utils) (in module pysindy.utils.base)

reshape_samples_to_spatial_grid() (pysindy.feature_library.base.BaseFeatureLibrary method) rossler() (in module pysindy.utils) (in module pysindy.utils.odes)

S

SampleConcatter (class in pysindy.utils) (class in pysindy.utils.axes) score() (pysindy.pysindy.SINDy method) (pysindy.SINDy method) set_params() (pysindy.differentiation.sindy_derivative.SINDyDerivative method) (pysindy.differentiation.SINDyDerivative method) (pysindy.SINDyDerivative method) simulate() (pysindy.pysindy.SINDy method) (pysindy.SINDy method) SINDy (class in pysindy) (class in pysindy.pysindy) SINDyDerivative (class in pysindy) (class in pysindy.differentiation) (class in pysindy.differentiation.sindy_derivative) SINDyEstimator (class in pysindy.deeptime) (class in pysindy.deeptime.deeptime) SINDyModel (class in pysindy.deeptime) (class in pysindy.deeptime.deeptime) SINDyOptimizer (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.sindy_optimizer) SINDyPI (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.sindy_pi)

SINDyPILibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.sindy_pi_library) size (pysindy.feature_library.base.BaseFeatureLibrary property) SmoothedFiniteDifference (class in pysindy) (class in pysindy.differentiation) (class in pysindy.differentiation.smoothed_finite_difference) SpectralDerivative (class in pysindy) (class in pysindy.differentiation) (class in pysindy.differentiation.spectral_derivative) SR3 (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.sr3) SSR (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.ssr) StableLinearSR3 (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.stable_linear_sr3) STLSQ (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.stlsq) supports_multiple_targets() (in module pysindy.utils) (in module pysindy.utils.base)

T

TensoredLibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.base) transform() (pysindy.ConcatLibrary method) (pysindy.CustomLibrary method) (pysindy.feature_library.base.BaseFeatureLibrary method) (pysindy.feature_library.base.ConcatLibrary method) (pysindy.feature_library.base.TensoredLibrary method) (pysindy.feature_library.ConcatLibrary method) (pysindy.feature_library.custom_library.CustomLibrary method) (pysindy.feature_library.CustomLibrary method) (pysindy.feature_library.fourier_library.FourierLibrary method) (pysindy.feature_library.FourierLibrary method) (pysindy.feature_library.generalized_library.GeneralizedLibrary method) (pysindy.feature_library.GeneralizedLibrary method) (pysindy.feature_library.identity_library.IdentityLibrary method) (pysindy.feature_library.IdentityLibrary method) (pysindy.feature_library.pde_library.PDELibrary method) (pysindy.feature_library.PDELibrary method) (pysindy.feature_library.polynomial_library.PolynomialLibrary method) (pysindy.feature_library.PolynomialLibrary method) (pysindy.feature_library.sindy_pi_library.SINDyPILibrary method) (pysindy.feature_library.SINDyPILibrary method) (pysindy.feature_library.TensoredLibrary method) (pysindy.feature_library.weak_pde_library.WeakPDELibrary method) (pysindy.feature_library.WeakPDELibrary method) (pysindy.FourierLibrary method) (pysindy.GeneralizedLibrary method) (pysindy.IdentityLibrary method) (pysindy.PDELibrary method) (pysindy.PolynomialLibrary method) (pysindy.SINDyPILibrary method) (pysindy.TensoredLibrary method) (pysindy.utils.axes.SampleConcatter method) (pysindy.utils.SampleConcatter method) (pysindy.WeakPDELibrary method)

TrappingSR3 (class in pysindy) (class in pysindy.optimizers) (class in pysindy.optimizers.trapping_sr3)

V

validate_control_variables() (in module pysindy.utils) (in module pysindy.utils.base) validate_input() (in module pysindy.utils) (in module pysindy.utils.base) (pysindy.feature_library.base.BaseFeatureLibrary method)

validate_no_reshape() (in module pysindy.utils) (in module pysindy.utils.base) van_der_pol() (in module pysindy.utils) (in module pysindy.utils.odes)

W

WeakPDELibrary (class in pysindy) (class in pysindy.feature_library) (class in pysindy.feature_library.weak_pde_library)

wrap_axes() (in module pysindy.utils) (in module pysindy.utils.axes)

X

x_sequence_or_item() (in module pysindy.feature_library.base)

Y

yeast() (in module pysindy.utils) (in module pysindy.utils.odes)